This paper presents a multi-scale lattice Boltzmann/finite element scheme that quantitatively links particulate mechanics to hydraulic properties of a grain assembly obtained from a simple shear discrete element simulation. A spatial homogenization is performed to recover the macroscopic stress from the micro-mechanical force chances. The pore geometries of the shear band and host matrix are then quantitatively evaluated through morphology analysis and flow simulations. Hydraulic properties estimated from multiscale flow simulations are compared with those inferred from volume averaging and geometric averaging schemes. Results from the discrete element simulations imply that grain sliding and rotation occur predominately within the dilatant shear band. These granular motions lead to dilation of pore space inside the shear band and increases in local permeability. While considerable anisotropy in the contact fabric is observed within the shear band, anisotropy of the permeability is, at most, modest in the assemblies composed of spherical grains.